Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHKLAHTSFGIVGMFVNTCMVAKYVIINWEMFSMKKVNNDTVFGILQLETLLGDINSIFS-EIESEYKMSREEILILLTLWQKGSMTLKEMDRFVEVKPYKRTRTYNNLVELEWIYKERPVDDERTVIIHFNEKLQQEKVELLNFISDAIASRATAMQNSLNAIIAV
2BV6 Chain:A ((21-124))
------------------------------------------------------VNRYYSNKVFKKYNLTYPQFLVLTILWDESPVNVKKVVTELALDTGTVSPLLKRMEQVDLIKRERSEVDQREVFIHLTDKSETIRPELSN-ASDKVASASSLSQD--------
General information:
TITO was launched using:
RESULT:
Template:
2BV6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53506 for 678 contacts (-78.9/contact) +
2D Compatibility (PS) -10708 + (NN) 1184 + (LL) 5760
1D Compatibility (HY) -6800 + (ID) 1250
Total energy: -65320.0 ( -96.34 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_2BV6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BV6-query.scw
PDB file :
Tito_Scwrl_2BV6.pdb
: