Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKNIVIKSMAALAILTSVTGINAAVVEETQQIANAEKNVTQVKDTNNFPYNGVVSFKDATGFVIGKNTIITNKHVSKDYKV-GDRITAHPNGDKGNGGIYKIKSISDYPGDEDISVMNIEEQAVERGPKGFNFNENVQAFNFAKDAKVDDKIKVIGYPLPAQNSFKQFESTGTIKRIKDNILNFDAYIEPGNSGSPVLNSNNEVIGVVYGGIGKIGSEYNGAVYFTPQIKDFIQKHIEQ
2W7U Chain:A ((1-200))
------------------------------------EKNVKEITDATKEPYNSVVAFVGGTGVVVGKNTIVTNKHIAKSNDIFKNRVSAHHSSKGKGGGNYDVKDIVEYPGKEDLAIVHVHETSTE----GLNFNKNVSYTKFADGAKVKDRISVIGYPKGAQTKYKMFESTGTINHISGTFMEFDAYAQPGNSGSPVLNSKHELIGILYAGSG--ESEKNFGVYFTPQLKEFIQNNIEK
General information:
TITO was launched using:
RESULT:
Template:
2W7U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35479 for 1685 contacts (-21.1/contact) +
2D Compatibility (PS) -21837 + (NN) -11554 + (LL) 3868
1D Compatibility (HY) -17600 + (ID) 5250
Total energy: -87852.0 ( -52.14 by residue)
QMean score : 0.388
(partial model without unconserved sides chains):
PDB file :
Tito_2W7U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W7U-query.scw
PDB file :
Tito_Scwrl_2W7U.pdb
: