Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKKKMLAATLSVGLIAPLASPIQESRANTNIENIGDGAEVIKRTEDVSSKKWGVTQNVQFDFVKDKKYNKDALIVKMQGFINSRTSFSDVKGSGYELTKRMIWPFQYNIGLTTKDPNVSLINYLPKNKIETTDVGQTLGYNIGGNFQSAPSIGGNGSFNYSKTISYTQKSYVSEVDKQNSKSVKWGVKANEFVTPDGKKSAHDRYLFV------QSPNGPTGSAREYFAPDNQLPPLVQSGFNPSFITTLSHEKGSSDTSEFEISYGRNLDITYATLFPRTGIY------AERKHNAFVNRNFVVRYEVNWKTHEIKVKGHN |
| 4IYC Chain:A ((10-292)) | -----------------------------NNIENIGDGAEVVKRTEDTSSDKWGVTQNIQFDFVKDKKYNKDALILKMQGFINSKTTYYNYKNTDH--IKAMRWPFQYNIGLKTNDPNVDLINYLPKNKIDSVNVSQTLGYNIGGNFNSGP---GNGSFNYSKTISYNQQNYISEVEHQNSKSVQWGIKANSFITSLGKMSGHDPNLFVGYKPYSQNP-------RDYFVPDNELPPLVHSGFNPSFIATVSHEKGSGDTSEFEITYGRNMDVTHATR--RT---GNSYLEGSRIHNAFVNRNYTVKYEVNWKTHEIKVKGHN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IYC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38175 for 2115 contacts (-18.0/contact) +
2D Compatibility (PS) -28805 + (NN) -13447 + (LL) 2528
1D Compatibility (HY) -26800 + (ID) 10050
Total energy: -114749.0 ( -54.25 by residue)
QMean score : 0.480
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