Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYQQSSFKENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFPTVEVLSQASEDEVLKYWEGLGYYSRARNFHTAIKEVYDKYEGLVPKDPDQFKALKGVGPYTQAAVMSIAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQ---ELLPYVTTEAGTFNQAMMELGALICTPKNPLCLFCPVQENCEAFDKGTFEKLPVKSKNVSKKVIEQSVFLIRNNQGQYLLQKR-SEKLLHGMWQFPMFESEHARRK------MTEKIGHDIQPVETPIFELKHQFTHLTWKIKVYAA----SGAIN--IETLPDDMIWFNLSDRDQYTFPVPMSKIYQFING |
1RRS Chain:A ((12-356)) | --PAREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLEALADADEDEVLKAWEGLGYYSRVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVNGNVMRVLSRLFLVTDDIAKPSTRKRFEQIVREIMAY--ENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVAEELPVKMK---VKQVPLAVAVLADDEGRVLIRKRDSTGLLANLWEFPSCETDGADGKEKLEQMV----GLQVELTE-PIVSFEHAFSHLVWQLTVFPGRLVHGGPVEEPYRLAPEDEL-------KAYAFPVSHQRVWR---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RRS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166925 for 2487 contacts (-67.1/contact) +
2D Compatibility (PS) -32958 + (NN) -4755 + (LL) 1568
1D Compatibility (HY) -34400 + (ID) 7650
Total energy: -245120.0 ( -98.56 by residue)
QMean score : 0.490
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