Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKFFFIGLLVFVVFFTAATIIWFSYDKNKYGTKQYDKTFKDDAFDNVSINLDSTELRIKRGNQFRVKYDGDNDILINIVDKTLKISDKRSKTRGYAIDMNPFHENKKTLTIEMPDKMIKRLNLSSGAGSVRISDVDLENTSIQSINGEVVIKNSNLDALDSKTNNSSTYISKSNIKNSNIKVVIGTLQIDKSQIKQSIFLNDHGDIEFKNMPSKVDAKASTKQGDIRFKYDSKPEDTILK----LNPGTGDSVVKNKTFTNGKVGKSDNVLEFYTI-DGNIKVE |
2BWF Chain:A ((10-68)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KSGQDKWEVNVAPESTVLQFKEAINKANGIPVANQRLIYSGKILKDDQTVESYHIQDGH---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BWF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8923 for 264 contacts (33.8/contact) +
2D Compatibility (PS) -5923 + (NN) -4074 + (LL) 13672
1D Compatibility (HY) -2800 + (ID) 900
Total energy: 8898.0 ( 33.70 by residue)
QMean score : 0.293
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