Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNDSNQGLQANPQYTIHYLSQEITRLTQENAMLKAYIQEQNEKSKSAEEE
1DEB Chain:A ((6-28))
----------------DQLLKQVEALKMENSNLRQELED-----------
General information:
TITO was launched using:
RESULT:
Template:
1DEB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 854 for 83 contacts (10.3/contact) +
2D Compatibility (PS) -2535 + (NN) -931 + (LL) 1252
1D Compatibility (HY) -800 + (ID) 250
Total energy: -2410.0 ( -29.04 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_1DEB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DEB-query.scw
PDB file :
Tito_Scwrl_1DEB.pdb
: