Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKKLLMNFFIVSPLLLATIATDFTPVPLSSNQIIKTAKASTNDNIKDLLDWYSSGSDTFTNSEVLDNSLGSMRIKNTDGSISLIIFPSPYYSPAFTKGEKVDLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLPTPIELPLKVKVHGKDSPLKYWPKFDKKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKITMNDGSTYQSDLSKKFEYNTEKPPINIDEIKTIEAEIN
2IJ0 Chain:A ((4-194))
-------------------------------------------DNIKDLLDWYSSGSDTFTNSEVLDNSLGSMRIKNTDGSISLIIFPSPYYSPAFTKGEKVDLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLPTPIELPLKVKVHGKDSPLKYWPKFDKKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKITMNDGSTYQSDLSKKFEYNTEKPPINIDEIKTIEAEIN
General information:
TITO was launched using:
RESULT:
Template:
2IJ0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29275 for 1450 contacts (-20.2/contact) +
2D Compatibility (PS) -20430 + (NN) -9777 + (LL) 3352
1D Compatibility (HY) -23200 + (ID) 9550
Total energy: -88880.0 ( -61.30 by residue)
QMean score : 0.742
(partial model without unconserved sides chains):
PDB file :
Tito_2IJ0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IJ0-query.scw
PDB file :
Tito_Scwrl_2IJ0.pdb
: