Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEQYSEINTDTLERVTEIFKALGDYNRIRIMELLSVSEASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSLDDIHVATMLKQAIHHANHPKESGL
4GGG Chain:A ((10-101))
----------DTLERVTEIFKALGDYNRIRIMELLSVSEASVGHISHQLNLSQSNVSHQLKLLKSAHVVKAKRQGQSMIYSLDDIHVATMLKQAIHHANHPK----
General information:
TITO was launched using:
RESULT:
Template:
4GGG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50729 for 586 contacts (-86.6/contact) +
2D Compatibility (PS) -9869 + (NN) -6193 + (LL) 828
1D Compatibility (HY) -12000 + (ID) 4500
Total energy: -82463.0 ( -140.72 by residue)
QMean score : 0.585
(partial model without unconserved sides chains):
PDB file :
Tito_4GGG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GGG-query.scw
PDB file :
Tito_Scwrl_4GGG.pdb
: