Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDFSNFFQNLSTLKIVTSILDLLIVWYVLYLLITVFKGTKAIQLLKGILVIVIGQQISMILNLTATSKLFDIVIQWGVLALIVIFQPEIRRALEQLGRGSFLKRYTSNTYSKDEEKLIQSVSKAVQYMAKRRIGALI-VFEKETGLQDYIETGIAMDSNISQELLINVFIPNTPLHDGAMIIQG--TKIAAAASYLPLSDSPKISKSLGTRHRAAVGISEVSDAFTVIVSEETGDISVTFDGKLRRDISNEIFEELLAEHWFGTRFQKKGVK |
3C21 Chain:A ((46-157)) | --------------------------------------------------------------------------------------------------------------------------KALDDIINANFGALIFLVDDPKKYEDVIQGGFWLDTDFSAEKLYEL-----SKMDGAIVLSEDITKIYYANVHL-VPDPTIPTGETGTRHRTAERLAKQTGKVVIAVSRRRNIISLYY-------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3C21.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -78944 for 806 contacts (-97.9/contact) +
2D Compatibility (PS) -11831 + (NN) -3668 + (LL) 14192
1D Compatibility (HY) -8000 + (ID) 1600
Total energy: -89851.0 ( -111.48 by residue)
QMean score : 0.351
|
|
|