Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQNKQILFNKIPEGMPQEDTFKIEEIDTPKLE----SDGVLVQTLYISVDPYMRGRMTKADSYVQPFEIGKPIVSHVVAKVIDSTLADYKKGDVVVGMLPWRIINHVQADQITKVPTTDVPLDLYLSVLGMPGQTAYHGLLDIGQPKAGDTVVVSAASGAVGSVVGQIAKIKGCRVVGIAGGDKKVNYLTETLGFDAGIDYKKE-DFAEALAQAVPDGIDVYFENVGGTVGDEVFKHLNRFARVPVCGAISSYNHPEADIGPRIQGTLIKKQVMMRGFLVSEFANAFKEASEQLATWVQEGKIQSQVTIEDGFENAPHAFKNLFTGDNFGKQVIKVTE
4HFN Chain:A ((5-342))VSNKQVILKNYVTGYPKESDMEIKNV-TIKLKVPEGSNDVVVKNLYLSCDPYMRSRMR------ESFAPGSPITGYGVAKVLESGDPKFQKGDLVWGMTGWEEYSIITP--LFKIHDKDVPLSYYTGILGMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCYVVGSAGSKEKVDLLKSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVLVNMKLYGRIAVCGMISQYNLEQTE-GVHNLFCLITKRIRMEGFLVFDYYHLYPKYLEMVIPQIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVMVSR


General information:
TITO was launched using:
RESULT:

Template: 4HFN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -199716 for 2822 contacts (-70.8/contact) +
2D Compatibility (PS) -34353 + (NN) -9744 + (LL) 560
1D Compatibility (HY) -35600 + (ID) 7000
Total energy: -285853.0 ( -101.29 by residue)
QMean score : 0.512

(partial model without unconserved sides chains):
PDB file : Tito_4HFN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HFN-query.scw
PDB file : Tito_Scwrl_4HFN.pdb: