Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIILMGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQAEALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDVTKDVIDILDHL
4QBG Chain:B ((1-215))
MNIVLMGLPGAGKGTQAERIVAKYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVRERLSKSDCERGFLLDGFPRTVAQAEALEEILEEMGRKLEHVIHIEVRQEELMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVAKRLEVNMKQMAPLLAFYDSKEVLRNVNGQQDMEKVFKDLRELLQGL
General information:
TITO was launched using:
RESULT:
Template:
4QBG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77655 for 1639 contacts (-47.4/contact) +
2D Compatibility (PS) -22990 + (NN) -10837 + (LL) 0
1D Compatibility (HY) -26400 + (ID) 7350
Total energy: -145232.0 ( -88.61 by residue)
QMean score : 0.587
(partial model without unconserved sides chains):
PDB file :
Tito_4QBG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QBG-query.scw
PDB file :
Tito_Scwrl_4QBG.pdb
: