Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKINDINDLVNATFQVKKFFRDTKKKFNLNYEEIYILNHILRSESNEISSKEIAKCSEFKPYYLTKALQKLKDLKLLSKKRSLQDERTVIVYVTDTQKANIQKLISELEEYIKN
2PEX Chain:A ((25-113))
---------LYSANLAMHKLYRGLLKALDLTYPQ-YLVMLVLW-ETDERSVSEIGERLYLDSATLTPLLKRLQAAGLVTRTR-------VIIALTETGRA---------------
General information:
TITO was launched using:
RESULT:
Template:
2PEX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26078 for 532 contacts (-49.0/contact) +
2D Compatibility (PS) -8811 + (NN) -4950 + (LL) 2392
1D Compatibility (HY) -7600 + (ID) 1250
Total energy: -46297.0 ( -87.02 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_2PEX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PEX-query.scw
PDB file :
Tito_Scwrl_2PEX.pdb
: