Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKVYVAGAIPEVGLKLLQE--HFEVEMYEGKGLVDKDTLIKGVKNATALISLLSTNVDKDVIDA-GKDLKIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNATADLTIGLVLAVARRIVEGDQLSRTTGFDGWAPLFFRGREVSGKTIGIIGLGEIGSAVARRARAFDMD-VLYTGPNRKEEKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLIDTEQFKMMKSTVYLINASRGPIVHEQALVQALKDNEIEGAALDVYEFEPDITD-DLKSLNNVVLTPHIGNATFEARDMMSKIVANAAISAVQGEKPQFVVN |
| 2GCG Chain:A ((8-322)) | LMKVFVTRRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGLRGE------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2GCG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -194611 for 2555 contacts (-76.2/contact) +
2D Compatibility (PS) -33853 + (NN) -18191 + (LL) 480
1D Compatibility (HY) -25200 + (ID) 5650
Total energy: -277025.0 ( -108.42 by residue)
QMean score : 0.589
|
|
|