Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKFNVENEHVEVEIEKLYKFSPELVYEAWTKKDLLKQWFMTSARTNK-EIEADVKEGGKYRIVDQQRNGKVNVIEGIYESLVMDEYV----KMTIGMPGLSETQDVIEVEFFERETGGTQMLFYYRSLVEKERRFTNLEYKQKKKEYHDAMVHGFELMFDKMYHVIETSTQQ
3OTL Chain:A ((7-119))
--------EHATLVIERHLKAPIARVFRAWSAPEAKRQWFACHGEWQALDYGLDFRPGGTERNYVADTDGLLHAYDAHYIDIVPNARIIYAYEMKLGETRISASLTTVA---FEAEPGGTKMVF-------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3OTL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18938 for 636 contacts (-29.8/contact) +
2D Compatibility (PS) -11508 + (NN) 974 + (LL) 5540
1D Compatibility (HY) -4000 + (ID) 1450
Total energy: -29382.0 ( -46.20 by residue)
QMean score : 0.401
(partial model without unconserved sides chains):
PDB file :
Tito_3OTL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OTL-query.scw
PDB file :
Tito_Scwrl_3OTL.pdb
: