Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRNRVMNSVVNKYLLHNRSIMFKNDQDVERFFYKREIENRKKHKQPST---LNV-KANLEKLSL---DDMQVFRFNFRH-----------QIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPE----FHIDDTFQAIQRVYDQLVSEVGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDALIEQDAVLSQFGVNEIMKKWANGLPLTDKRISPINGTIEGLPPVYMFGGGREMTHPDMKLFEQMMLQHHQYIEFYDYPKMVHDFPIYPIRQSHKAIKQIAKSIDEDVTQNN |
| 3G9Z Chain:A ((14-239)) | ----------------------------------------REKAVPPGTEVPLDVMRKGMEKVAFKAADDIQVEQVTVAGCAAEWVRAPGCQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHPFPAAVEDGVAAYRWLLDQGFKP---QHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTN-DSFKTRAEADPMVAPGGINKMAARYLNGADAKHPYASPNFANLKGLPPLLIHVGRDEV---------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87809 for 1586 contacts (-55.4/contact) +
2D Compatibility (PS) -21356 + (NN) -10104 + (LL) 8008
1D Compatibility (HY) -7600 + (ID) 3100
Total energy: -121961.0 ( -76.90 by residue)
QMean score : 0.477
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