Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKHLQDHIQFLEQFINNVNALTAKMLKDLQNEYEISLEQSNVLGMLNKEPLTISEITQRQGVNKAAVSRRIKKLIDAKLVKLDKPNLNIDQRLKFITLTDKGRAYLKERNAIMTDIAQDITNDLNSEDIENVRQVLEVINHRIKTYSNHK
3KP7 Chain:A ((1-149))
MVRRIEDHISFLEKFINDVNTLTAKLLKDLQTEYGISAEQSHVLNMLSIEALTVGQITEKQGVNKAAVSRRVKKLLNAELVKL-----------KIIKLSNKGKKYIKERKAIMSHIASDMTSDFDSKEIEKVRQVLEIIDYRIQSYTS--
General information:
TITO was launched using:
RESULT:
Template:
3KP7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47103 for 818 contacts (-57.6/contact) +
2D Compatibility (PS) -14858 + (NN) -4231 + (LL) 496
1D Compatibility (HY) -18800 + (ID) 4350
Total energy: -88846.0 ( -108.61 by residue)
QMean score : 0.675
(partial model without unconserved sides chains):
PDB file :
Tito_3KP7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KP7-query.scw
PDB file :
Tito_Scwrl_3KP7.pdb
: