Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAYTYTLKDIIEITGVTKRTLHYYDEIGLLVPD-KNDKNYRVYKQQDLEKLQKILILKSFDFDIAKIKQYISYDNEQLR------KLLSEQISKLDKKISDLQLIRRSVCEFIKGLSLIDTSILNKTLQSQYDKEASIKYGHTKAYQSFIRRKDSLQSQDIRHKLTTIFNKFNHMSLSHYPIQDCSDLVFEWKAFMNTIADFDDETLCCIAKTYEDDTRFKDYFNSYDNQNLASYISEAVNYFLSNVNKSDNF |
1Q05 Chain:A ((3-107)) | ------ISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHLNELTLLRQARQVGFNLEESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEELQSMR--------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q05.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27871 for 560 contacts (-49.8/contact) +
2D Compatibility (PS) -10027 + (NN) -2906 + (LL) 10172
1D Compatibility (HY) -5200 + (ID) 1250
Total energy: -37082.0 ( -66.22 by residue)
QMean score : 0.621
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