Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQEILNVEGMSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQYDDSKVAVSQMKDAIEDQGYDVV
1OSD Chain:A ((7-67))
-----LSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYP--
General information:
TITO was launched using:
RESULT:
Template:
1OSD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43650 for 422 contacts (-103.4/contact) +
2D Compatibility (PS) -6594 + (NN) -1510 + (LL) 992
1D Compatibility (HY) -5200 + (ID) 1150
Total energy: -57112.0 ( -135.34 by residue)
QMean score : 0.673
(partial model without unconserved sides chains):
PDB file :
Tito_1OSD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OSD-query.scw
PDB file :
Tito_Scwrl_1OSD.pdb
: