Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKSKRLEIVSTIVKKHKIYKKEQIISYIEEYF--------------GVRYSATTIAKDLKELNIYRV-PIDCETWIY---------KAINNQTEQEMREKFRHYCEHEVLSSIINGSYIIVKTSPGFAQGINYFIDQLNIEEILGTVSGNDTTLILTASNDMAEYVYAKLFK
3FHZ Chain:A ((16-153))
---------------ANRAGRQARIVAILSSAQVRSQNELAALLAAEGIEVTQATLSRDLEELGAVKLRGADGGTGIYVVPEDGSPVRGVSGGTDRMAR-----LLGELLVSTDDSGNLAVLRTPPGAAHYLASAIDRAALPQVVGTIAGDDTILVVA---------------
General information:
TITO was launched using:
RESULT:
Template:
3FHZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41703 for 625 contacts (-66.7/contact) +
2D Compatibility (PS) -12614 + (NN) -3210 + (LL) 3448
1D Compatibility (HY) -5600 + (ID) 1350
Total energy: -61029.0 ( -97.65 by residue)
QMean score : 0.374
(partial model without unconserved sides chains):
PDB file :
Tito_3FHZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FHZ-query.scw
PDB file :
Tito_Scwrl_3FHZ.pdb
: