Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIELWPAIDLIGSTSVRLTEGKYDSEEKMSRSAEESIAYYSQFECVNRIHIVDLIGAKAQYAREFDYIKSLRRLTTKDIEVGGGIRTKSQIMDYFAAGINYCIVGTKGIQDTDWLKEMAHTFPGR-IYLSVDA-YGED--IKVNGWEEDTELNLFSFVRQLSDIPLGGIIYTDIAKDGKMSGPNFELTGQLVKA--TTIPVIASGGIRHQQDIQRLASLNVHAAIIGKAAHQASFWEGLE |
| 4GJ1 Chain:A ((3-232)) | --QIIPALDLIDGEVVRLVKGDYEQKKVYKYNPLKKFKEYEKAG-AKELHLVDLTGAKDPSKRQFALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIKDATLCLEILKEFGSEAIVLALDTILKEDYVVA--------DKKLMEVLDFYSNKGLKHILCTDISK-----GVNVRLY-KLIHEIFPNICIQASGGVASLKDLENLKGI-CSGVIVGKALLDGVF----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GJ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56083 for 1604 contacts (-35.0/contact) +
2D Compatibility (PS) -22360 + (NN) -1633 + (LL) 684
1D Compatibility (HY) -2400 + (ID) 1700
Total energy: -83492.0 ( -52.05 by residue)
QMean score : 0.322
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