Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKKFVSSCIASTILFGTLLGVTYKAEAATVHVAGGVWSHGIGKHYVWSYYSHNKRNHGSTAVGKYSSFS--GVARPGVQSKASAPKAWGGNKTFYSLH-
2LGN Chain:A ((1-66))
----------------------------------EGTWQHGYGVSSAYSNYHHGSKTHSATVVNNNTGRQGKDTQRAGVWAKATVGRNLTEKASFYYNFW
General information:
TITO was launched using:
RESULT:
Template:
2LGN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4409 for 444 contacts (9.9/contact) +
2D Compatibility (PS) -6668 + (NN) -1417 + (LL) 3228
1D Compatibility (HY) -400 + (ID) 900
Total energy: -1748.0 ( -3.94 by residue)
QMean score : 0.237
(partial model without unconserved sides chains):
PDB file :
Tito_2LGN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LGN-query.scw
PDB file :
Tito_Scwrl_2LGN.pdb
: