Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRALETIATLREYRKSLKE------SVGFVPTMGALHRGHQSLIERSLKENSHTIVSVFVNPTQFGANEDFSAYPRPLEKDLALCEKSGVNAVFAPKIGEMYPYEAKQRLKLYAPAFLSHSLEGAVRKGHFDGVVQVVLRLFHLTNPTRAYFGKKDAQQLLIIQHLVQDLLLDIEIAPCEIVRDSDNLALSSRNVCLNATERKQALAIPKALEKIQQAIDRGEKACEKLKKLGLEIL---KNLEVDYLECCN-HKLEPLKTIEPANTLVLVAARVGKTRLLDNLWV |
| 3UY4 Chain:A ((3-281)) | --AMQVITSVKEAKQIVKDWKSHQLSIGYVPTMGFLHDGHLSLVKHA-KTQDKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDNGVDMVFIPDATQMY---LKNFSTYVDMNTITDKLCGAKRPGHFRGVCTVLTKFFNILNPDIVYMGQKDAQQCVVVRHMVDDLNFDLKIQICPIIREEDGLAKSSRNVYLSKEERKASLAISQSIFLAEKLVREGEKNTSKIIQAMKDILEKEKLIKIDYIELVDFNTMENIENITD-NVLGAVAAFVGKTRLIDNFLV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UY4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154786 for 2210 contacts (-70.0/contact) +
2D Compatibility (PS) -29026 + (NN) -11039 + (LL) 684
1D Compatibility (HY) -27600 + (ID) 5900
Total energy: -227667.0 ( -103.02 by residue)
QMean score : 0.408
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