Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSAHFLKIVFLVGMCVSSLFAEGLEGFFNALEAQLKSPIAKGILMVIFIGIAIYVWRNLDRWKEILFTILGVVFGIFLFFKAPSLANWFMGVF
1QO1 Chain:D ((12-39))
------RIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIRIPVGPETLGRIMNVI
General information:
TITO was launched using:
RESULT:
Template:
1QO1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20047 for 325 contacts (-61.7/contact) +
2D Compatibility (PS) -2615 + (NN) 2388 + (LL) 676
1D Compatibility (HY) -800 + (ID) 100
Total energy: -20498.0 ( -63.07 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_1QO1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QO1-query.scw
PDB file :
Tito_Scwrl_1QO1.pdb
: