Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADSLAGIDQVTSLHKNNELQLLCFRLGKNKDLYAVNVFKIREVVKYHGNLTIISHENNSLVEGLIIIRELTIPLIDMKKWFYYDSQNKSKDLRPYRIEKEKGEDDIVMICEFSRWTIGVRIYEADRILSKKWTEMEQSAGLGGSAGNNKLVSRTRYFDGRLVQVVDIEKMLIDVFPWIEDEKHNDLETLSKIHSNQCVLLADDSPSVLKTMQMILDKLGVKHIDFINGKTLLEHLFNPTTDVSNIGLIITDLEMPEASGFEVIKQVKNNPLTSKIPIVVNSSMSGSSNEDMARSLKADDFISK--SNPKDIQRVVKQFLELA |
| 1NXO Chain:A ((4-116)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDI-----IILDLM---IDGLEVAKTIRK---TSSVPILMLSAKDSEFDKVIGLELGADDYVTKPFSN-RELQARVKALLRRS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NXO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70409 for 834 contacts (-84.4/contact) +
2D Compatibility (PS) -11597 + (NN) -6335 + (LL) 14568
1D Compatibility (HY) -8800 + (ID) 1700
Total energy: -84273.0 ( -101.05 by residue)
QMean score : 0.685
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