Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKFLFKQKFCESLPKSFSKTLLALSLGLILLGVFIPFPKVPKHQSVPLALHFTEHYARFIPTILSVAIPLIQRDAVGLFQVANASIATTFLTHATKRALNHVTINDQRLGERPYGGNFNMPSGHSSMVGLAVAFLMRRYSVK---------------------------KY-LWLLPLIPLTMLARIYLDMHTIGAVLAGLGTGMLCVGLFTSPKNLN |
1QI9 Chain:A ((391-510)) | --------------------------------------------------------------------------------------------NPNNEVTYLLPQAIQE-----GSPTHPSYPSGHATQNGAFATVLKALIGLDRGGDCYPDPVYPDDDGLKLIDFRGSCLTFEGEINKLAVNVAFGRQMLGIHYRFDGIQGLLLGETITVRTLHQELMT |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QI9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52693 for 576 contacts (-91.5/contact) +
2D Compatibility (PS) -9581 + (NN) -4273 + (LL) 8300
1D Compatibility (HY) 2800 + (ID) 650
Total energy: -56097.0 ( -97.39 by residue)
QMean score : 0.155
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