Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSLFHLKFLKPLSCLQAGLLYSLIFGVLYHFPLFAYVYKESNQVSFIAMIIIVLFCVNGALFLALGLISAYLMRWSAIVFSWLNSVAFYFISAYKVFLNKSMMGNVLNTNTHEVLGFLSVKLFVFIVVFGVLPGYVIYKIPLKNSSKKAPFLAILALVFIFIASAFMNAKNWLWFDKHAKFIGGLILPFAYSVNAFRVSALKFFAPTIKPLPLFSPNHSHSFVVLVIGESARKSNYALYGYEKPTTPRLSKRLENHELTLFNATSCATYTTASLECILDSSFKNSL---------------GAYENLPTYLTKAGVKVFWYSANDGEKN-V-------KVTSYLKNY----ELI-----QKCP-N-----------C-------EAIAPYDESLLYNLPNLLKER-SNENILLILHLAGSHGPNYDNKVPLNFR-VFKPYC----SS-AD----LSSCSKESLINAYDNTIFYNDYLLDKIISMLENAK--QPALMIYLSDHGESLGEG-------------AYYLHGIPKSIAPKEQYEIPFILYANDLFKEKHSIIQTQTPINQNTIFHSVLGVFEDFKTPSAVYRPSLDLLKHKKE |
| 3ED4 Chain:A ((27-377)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QPNLVIIMADDLGYGDLATYGHQIVKTPNIDRLA-QEGVKFTDYYAPAPLSSPSRAGLLTGRMPFRTGIRSWIPSGKDVALGRNELTIANLLKAQGYDTAMMGKLHLNAGGDRTDQPQAQDMGFDYSLANTAGFVTDATLDNAKERPRYGMVYPTGWLRNGQPTPRADKMSGEYVSSEVVNWLDNKKDSKPFFLYVAFTEVHSP-LA--SPKKYLDMYSQYMSAYQKQHPDLFYGDWADKPWRGVGEYYANISYLDAQVGKVLDKIKAMGEEDNTIVIFTSDNGPVTREARKVYELNLAGETDGLRGRKD---NLWEGGIRVPAIIKYGKHLP---QGMVSDTPVYGLDWMPTLAKMMNFKLPTDRTFDGESLVPVLEQK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ED4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165871 for 2258 contacts (-73.5/contact) +
2D Compatibility (PS) -28942 + (NN) -7969 + (LL) 19736
1D Compatibility (HY) -10000 + (ID) 1750
Total energy: -194796.0 ( -86.27 by residue)
QMean score : 0.335
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