Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKFVRNVVLFILTAIFLAFMLLVSYCMPHYSVAVISGVEVKRMNENENTPNNKEVKTLARDVYFVQTYDPKDQKSVTVYRNEDTRFGFPFYFKFNSADISALAQSLVNQQVEVQYYGWRINLFNMFPNVIFLKPLKESDEMSKPVFSWILYALLLVGFFISARSVCTLFKGKAH |
2ZXX Chain:C ((230-267)) | -------------------------------------------------------------------------------------------------AKVKQGVQEMMRKRFEERNVG---QIKTVYPTSYRFRQECN------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZXX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2227 for 138 contacts (16.1/contact) +
2D Compatibility (PS) -3781 + (NN) -103 + (LL) 11348
1D Compatibility (HY) 4400 + (ID) 100
Total energy: 13991.0 ( 101.38 by residue)
QMean score : -0.122
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