Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLNYDFLELVDDEPQRNTSLTSAIDKALADKKLARQNKPRVRVKDNLSLSETLDAYGRELSRLKNQQETIKASTIESSNLNSIVNKIKSGLPFGTISAFRPFKEAFIKDFTQDERELLVEAYKSGYKASQLDKVSKKWRDDPNPIDASYLADAFLREYRTIALKLSTALGKPFVNKFLNPKSETTMKDFMSSEKFVKKYRFTQKDNIKRTQELKSLLDQKRHFLGYLQVTGYWKDKLNDPLLPSKEVSFFVFQNEPSNSFNLKDQLLDLAKYFNQEAICYCQNAETGKVDLVLATEKDFGKVDMTFTGITFTIPLTQSITRLHNKVYTFFDKQGKDNYGVFFDELSTTKLKAMSIPKIADEFYRHLENRVKSFIRARQYHGSPRTFDADDIEKYELQAIKRLDLQRCAKSKSFKASYNHNIKINNLANALRQGKEVSKTLITKVLANTIDTDAGYCFISDLATQLGNISPRLSKSIVTAIEQAEGIRLLYALIDKVSYNSLHNTLNFIFDIDNPMSDQSLNELVVEVPREALKNVKLPQIKNELTSQIFDGAYQFRGNDYQFKG |
| 1VZI Chain:A ((72-107)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EEKHYIQWIELLAD--DK----CY----TQFLKPGQAPEAVFLIEAAKVVAREYCNIHGHWKAEN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VZI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1136 for 161 contacts (-7.1/contact) +
2D Compatibility (PS) -3951 + (NN) -112 + (LL) 34964
1D Compatibility (HY) -2800 + (ID) 300
Total energy: 26665.0 ( 165.62 by residue)
QMean score : 0.261
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