Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKVLYALMGFLLVFSALKADDFLEEANETAPANLNHPMQDLNAIQGSFFDKNRSKMSNTLNIDYFQGQTYKIRLRYAMATLLFFSKPISDFVLGDKVGFDAKILESNDRILLIKPLQIGVDSNISVIDSEGKIFSFYVFSTTFTSSKHPNLQVFIEDKNYYTNAFIKPQKENQENMSENAPKDAQKNNKPLKEEKEETKEKEEETIIIGDNTNAMKIIKKDIQKGYKALKSSQRKWYCLWACSKKSKLSLMPKEIFNDKQFTYFKFDKRLALSKFPVIYKVVDGYDNPVNTRIVGDYIIAEDVSTKWTLRLGKDYLCIRFVKRRKGE |
| 2FUQ Chain:A ((587-666)) | --------------------------------------------------------------------------------------------------------------------LPDAANSNITSIGGKGK--DFWVFGTNYTNDPKPGTDEALERGEWRVE--ITPKKAAAEDYYLNVIQIADNTQQKLHEVKRIDGDKVVGVQLADRIVTFSKTSETVDRPFGFSVVGKGTFKFVMTDLLPGTWQVLKDGKILYPALSAKGDDGALYFEGTEGTYRFLR--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FUQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 24840 for 314 contacts (79.1/contact) +
2D Compatibility (PS) -7929 + (NN) 3517 + (LL) 12596
1D Compatibility (HY) 4000 + (ID) 200
Total energy: 36824.0 ( 117.27 by residue)
QMean score : 0.206
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