Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRMLAEFEKIQAILMAFPHEFGDWAYCIEEARESFLHIIQTIAKHAKVLVCV---HTNDTIGYETLKNLPGVEIARIDTNDTWARDFG-AISVENHGVLECLDFGFNGWG-----LKYPSNLDNQVNFKLKHLGFLKHPLKTMPYILEGGSIESDGAGSILTNTQCLLEKNRNPHLNQNGIETMLKKELGAKQVLWYSYGYLKGDDTDSHTDTLARFLNKDTIVYSACEDENDEHYTALKKMQEELKTFKKLDGTPYKLIPLEIPK----------------AVYNENQQRLPATYVNFLLCNNALIVPTYNDPNDTLILETLRQHTP-LEVIGVDCNTLIKQHGSLHCVTMQLY |
| 2EWO Chain:A ((16-365)) | --RMPGEFEKQKQIWMLWPWRNDNWRLGAKPAQKAFLEVAEAISEFEPVSLCVPPLQYENALARVSELGSHNIRIIEMTNDDAWIRDCGPTFLVNDKGDLRAVDWEFNAWGGLVDGLYFPWDQDALVARKVCEIEGVDS-YKTKDFVLEGGSIHVDGEGTVLVTEMCLLHPSRNPHLTKEDIEDKLKDYLNCVKVLWVKDG-IDPYETNGHIDDVACFIRPGEVACIYTDDKEHPFYQEAKAAYDFLSQQTDAKGRPLKVHKMCVTKEPCYLQEAATIDYVEG-------EMAIASYLNFLIVNGGIILPQYGDENDQLAKQQVQEMFPDRKVVGVRTEEIAYGGGNIHCITQQQP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EWO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 60243 for 2604 contacts (23.1/contact) +
2D Compatibility (PS) -30547 + (NN) 13508 + (LL) 716
1D Compatibility (HY) 14400 + (ID) 750
Total energy: 57570.0 ( 22.11 by residue)
QMean score : 0.056
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