Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIEISEWLQKLDDALDKVVAKKEPESFLKPIISPIEDYQKSVRQIQAQFTDAPKFNEEGAYPQFLSCGLLQVRGKNGANMEFLLPKVYPFPPKSLYIEHEKDGQFLREMLMRLLSSAPLVQLEVILIDALSLGGIFNLARRLLDKNNDFIYQQRILTESKEIEEALKHLHEYLKVNLQEKLAGFRDFVHYNENAKDSLPLKALFLSGVDALSKDALYYLEKIMRFGSKNGVLSFVNLESEKNNQSAEDLKRYAEFFKDRTSFECLKYLNVEIISDQGIKSQHMQDFADKIKAYYKQKKEVKRELKDLQRDKEFWTKSSQHEVSVPVGWDINHKEVCFKIGNEQNHTLICDHSGSGKSNFLHVLIQNLAFYYDPDEVQLFLLDYKEGVEFNAYVADPALEHARLVSV---ASSISYGITFLKWLCDEMQKRADRFKQFNVKDLSDYRK--------HEKMPRLIVVIDEFQVLFSDNKSTKAVEGHLNTLLKKGRSYGVHLVLATQTMRGTDINPSFKAQIANRIALPMDAEDSSSVLGDDAACEIQKPEGIFNNNGGNRKYHTKMSVPKAPDDFKSFLTKIHAEFNQRNLAPIDRKIYNGETPLKMPDTLKANEMRLHLGKKVDYEQKDLIVEFESNESHLLVVIQDLNARIALMKLLFQNVKSANKELVFCNKEKRLIRSFDAQKEYGITPVENILSVLDTAMNPNSALVIDNLNEAKELHDKVGAEKLKSFLEKAIDNEQYCVIFAHDFRQIKTNYHFDKLKELLNNHFKQCLAFRCNGENLNAIKSDLPPPSKLNVLLIELSKDSVTEFRPFSL |
4N1A Chain:A ((109-249)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGKSTMLRTLITSLALLHTPQEVQFYCLDFGGGTL--AGLAE--LPHVGSVATRLDADRIRRTVAEVSAL---LEQREQEFTERGIDSMATYRRLRATGEYAGDGFGDVFLVVDNWLTLRQDY---EALEDSITQLAARGLGYGIHVVLSSNKWSEFRTSIRDLLGTKLELRLGDPYESEVDRKKAANVPENRPGRGLTRDGYHFLTALPRIDGDTSAETLTEGIATTVKTIREAWHGPTAPPVRMLPNVLPAAQLPSAAESGTRIPIGIDEDSLSPVYLDFNTDPHFLVFGDTECGKSNLLRLITAGIIERYTPQQARLIFIDYSRSLLDVATTEHQIGYAASSTAASSLVRDIKGAMEARLPPPDLTPEQLRSRSWWTGAELFLVVDDYEMVATSDNPLRPLAELLPQARDIGLHLIIARSMGGAGRALYEPIIQRIKEMASPGLVMSGNKDEGILLGNVKP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91801 for 940 contacts (-97.7/contact) +
2D Compatibility (PS) -14363 + (NN) -8314 + (LL) 26136
1D Compatibility (HY) -11200 + (ID) 2000
Total energy: -101542.0 ( -108.02 by residue)
QMean score : 0.452
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