Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNTYAQESKLRLKTKIGADGRCVIEDNFFTPPFKLMAPFYPKDDLAEIMLLAVSPGLMKGDAQDMQLNIGPNCKLRITSQSFEKIHNTEDGFASRDMHIVVGENAFLDFAPFPLIPFENAHFKGNTTISLRSSSQLLYSEIIVAGRVARNELFKFNRLHTKISILQDEKPIYYDNTILDPKTTNMNNMCMFDGYTHYLNLVLVNCPIELSGARELIEESEGVDGAVSKIASSHLCLKALAKGSEPLLHLREKIARLVTQTTTQKV |
2K6W Chain:A ((79-114)) | ------------------------------------------PGGYHFMLLGLKRPLKAGEEVELDLLFAGGKVLKVVLPVEAR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2K6W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -3813 for 111 contacts (-34.4/contact) +
2D Compatibility (PS) -3658 + (NN) 1782 + (LL) 14928
1D Compatibility (HY) -3200 + (ID) 350
Total energy: 5689.0 ( 51.25 by residue)
QMean score : 0.043
|
|
|