Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIFGTDGVRGKAGVKLTPMFVMRLGIAAGLYFKKHSQTNKILIGKDTRKSGYMVENALVSALTSIGYNVIQIGPMPTPAIAFLTEDMRCDAGIMISASHNPFEDNGIKFFNSYGYKLKEEEERAIEEIFHDEELLHSSYKVGESVGSAKRIDDVIGRYIAHLKHSFPKHLNLQKLRIVLDTANGAAYKVAPVVFSELGADVLVINDEPNGCNINEQCGALHPNQLSQ---EVKKYRADLGFAFDGDADRLVVVDNLGNIVHGDKLLGVLGVYQKSKNALSSQAV-VATSMSNLALKEYLKSQDLELKHCAIGDKFVSECMRLNKANFGGEQSGHIIFSD-YAKTGDGLVCALQVSALVLESKLVSSIALNPFELYPQSL----VNLNI---QKKPPLESLKGYSAL----LKELDQLEIRH-----LIRYSGTENKLRILLEAKDEKLLESKMQELKEFFEGQLC |
| 4MRQ Chain:A ((5-444)) | --IFRAYDIRGVVGDTLTAETAYWIGRAIGSESLARGEPC-VAVGRDGRLSGPELVKQLIQGLVDCGCQVSDVGMVPTPVLYYAANVLEGKSGVMLTGSHNPPDYNGFKIVVA-GETLANEQIQALRERIEKNDL-------ASGVGSVEQV-DILPRYFKQIRDDIAMA---KPMKVVVDCGNGVAGVIAPQLIEALGCSVIPLYCEVDGNFPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWK---TGHSLIKKKMKETGALLAGEMSGHVFFKERWFGFDDGIYSAARLLEILSQDQRDSE---HVFSAFPSDISTPEINITVTEDSKFAIIEALQRDAQWGEGNITTLDGVRVDYPKGWGLVRASNTTPVLVLRFEADTEEELE----RIKTVFRNQLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MRQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171041 for 3808 contacts (-44.9/contact) +
2D Compatibility (PS) -44079 + (NN) -14913 + (LL) 2268
1D Compatibility (HY) -24400 + (ID) 6050
Total energy: -258215.0 ( -67.81 by residue)
QMean score : 0.441
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