Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKEQEAQEIAKKAVKIVFFLGLVVVLLMMINLYMLINQINASAQMSHQIKKIEERLNQEQK
3FXQ Chain:A ((31-46))
-------------------------------------------PALSAAIQQLEDELKAPLL
General information:
TITO was launched using:
RESULT:
Template:
3FXQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2774 for 53 contacts (52.3/contact) +
2D Compatibility (PS) -1782 + (NN) -763 + (LL) 5408
1D Compatibility (HY) -1600 + (ID) 200
Total energy: 3837.0 ( 72.40 by residue)
QMean score : 0.553
(partial model without unconserved sides chains):
PDB file :
Tito_3FXQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FXQ-query.scw
PDB file :
Tito_Scwrl_3FXQ.pdb
: