Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPFVPTRSLKERKIDFIEAVLNPNAPKGGLYTLEH-------FETLEWQDC----LGMS---YSELVEHVFELLNLEIPKNLLASALKRYENFDNPKNPAPIFALNERLFVQELYHGPSLAFKDMALQPLASLFSNLAVGKNEKYLVLVSTSGDTGPA--TLEGLAGMPNVFVVCLYPKDGTSLVQKLQMVTQNASNLKVFGVSGDFDDAQNALKNLLKDDDFNEALKARQLKLSVANSVNFGRIAFQIVYHIWGFLELYKKGAINSKEKITLAIPSGNFGNALGAFY-----AKKMGL--NIAKIKVVTNSN-DVLREFIETGRYDLTKRSLKQTFSPAMDILKSSNVERALFSLFGFERTLELMQALEEEKFYALKPKELALLQEHFSCASCSDEDCLKTIQEVYAEHQYLIDPHTATALNASLKTH--------EKTLVSATASYEKFPKTTLLALNEQKKNDDDKAALETLKNSYNTPDSQRLDDLFERGIKHQEVLKLNEIKSSILLWLENTH |
| 2C2B Chain:A ((68-443)) | ---------------------------GGLLDVEHDMEALKRFDGAYWRDLFDSRVGKSTWPYGSGVWSKKEWVLPEIDDDDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAGIPSIVFL---PANKISMAQLVQPIANGAF---VLSIDTDFDGCMKLIREITA-----------ELPIYLANSLNSLRLEGQKTAAI----EILQQ--FDWQVPDWVIVPGGNLGN-IYAFYKGFKMCQELGLVDRIPRMVCAQAANANPLYLHYKSGWKDFKPMTASTTFASAIQIGDPVSIDRAVYALKKCNGIVE--EATEEELMDAMAQADSTGM---FIC------------------------PHTGVALTALFKLRNQGVIAPTDRTVVVSTAHGLKFTQSKIDYHSNAIPDMACRFSNPPVDVKADFGAVMDVLKSYLG------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C2B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91353 for 3069 contacts (-29.8/contact) +
2D Compatibility (PS) -36687 + (NN) -10216 + (LL) 7136
1D Compatibility (HY) -19600 + (ID) 4850
Total energy: -155570.0 ( -50.69 by residue)
QMean score : 0.250
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