Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLIHICCSVDNLYFLKKAKEAFAGEKIVGFFYNPNIHPYSEYLLRLEDVKRTCEMLGIELLEGDYELEKFLDKAKGKELLGEKSERCFECFDLRLEASALKAFELGEEKFTTTLLTSPKKDPNQLIAKGQHIAQRHNLEFVVFRNDNFEHFKSELDLNLQALARENELYRQNYCGCQFALKIQKESQNRSPFELYSPLKRQILPASIEERTQVFRELDAAKKDANKPFLAQKTIATYRLLNGGVWLSKNSNPLDCCILARSKSKAKVRINDLRWVFSQRLSALVGYSQRDETLFLTLEGLNTLMAKNYDNLKELNLNPLSYEEELSLRALVSGSESINPIIVLEERTEKTLFVEIKSIFQEEKVFYLL |
2DPL Chain:A ((29-127)) | ------GGVDSSTAAVLAHKAI-GDRLHAVFVNTGFLRKGEPE---FVVKTFRDEFGMNLHYVDAQ-DRFFSALKGVTD-PE--EKRKIIGRVFIEVFEEVAKKIGAEYLIQGTIAPLNLKLIEPLRDLYKDEVRELAKFLGLPEKIYNRMPFPGPGLAVRVIGEVTPEKIRIVREANAIVEEEVERAGLRPWQAFAVLLGVKTVGVQGDIRAYKETIAVRIVESIDGMTANAMNVPWEVLQRIAFRITSEIPEVGRVLYDITNKPPATIEFE----------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DPL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1521 for 598 contacts (-2.5/contact) +
2D Compatibility (PS) -10874 + (NN) -8177 + (LL) 8676
1D Compatibility (HY) 400 + (ID) 1100
Total energy: -12596.0 ( -21.06 by residue)
QMean score : 0.450
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