Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTINTHYTPNFTQLQTLNNINNDATIKDRNQAEQDLQQSSIQDGFSQDNTQNAPDFDRLQALNAINNDGEIKDKSQVEKSLVDGENTPEIYSSLDTYA
2E8W Chain:A ((212-267))
-------------------------IRDDYLNLKDFQM-----GFAEDITEGKLSFPIVHALNFTKTKGQTEQHNEILRILLLRTSDKDIKLKLIQIL
General information:
TITO was launched using:
RESULT:
Template:
2E8W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 28695 for 298 contacts (96.3/contact) +
2D Compatibility (PS) -5784 + (NN) -4562 + (LL) 1428
1D Compatibility (HY) -2800 + (ID) 700
Total energy: 16277.0 ( 54.62 by residue)
QMean score : 0.410
(partial model without unconserved sides chains):
PDB file :
Tito_2E8W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E8W-query.scw
PDB file :
Tito_Scwrl_2E8W.pdb
: