Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLAFSLLFTGTFLGLFLNASDFKSMDNKQLLEQAGKVAPSEVPEFRTEVN----KRLEAMKEEERQ-KYKADFKKAMDKNLASLSQEDRNKRKKEILEVIANKKKTMTMKEYREEGLDLHDCACEGPFHDHEKKGQKGKKPSHHKH |
4KSB Chain:A ((878-931)) | ------------------------QALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAACFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAVGQVSSFAPDYAKATVSA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4KSB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 20672 for 235 contacts (88.0/contact) +
2D Compatibility (PS) -5371 + (NN) -3008 + (LL) 1888
1D Compatibility (HY) -3600 + (ID) 850
Total energy: 9731.0 ( 41.41 by residue)
QMean score : 0.367
|
|
|