Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGFLKVLKHDALGQVGNIVIGNFLITLTVLAVCFSSQ---SAEETTMLTLSYTLFFILGAFLLVAISVGAIKNLNALFSKRGVLSFSLPISLESLLLPKILLPMVFFIFSLFWFVASVRLGYYLFNAQSSVLFILHTALKTFALKPTKTIGVALFLGLVLMKFLFVLSVLNATRIKKARFLLGGLLFILVGVVLELAFNSLLPLMSSSLSINEGFYYFLQQQELQENKYYLLWGVDFLKILLLYGVIRYLLTHKLELD |
1KV8 Chain:A ((3-63)) | --------------------------LPMLQVALDNQTMDSAYETTRLIAEEVDIIEVGTILCVGEGVRAVRDLKALYPHKIVLADAKIADAGKILSRMCFEANADWVTVICCADINTAKGALDVAKEFNGDVQIELTGYWTWEQAQQWRDAGIGQVVYHRSRDAQAAGVAWGEADITAIKRLSDMGFKVTVTGGLALEDLPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIAELW------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55997 for 384 contacts (-145.8/contact) +
2D Compatibility (PS) -6134 + (NN) -702 + (LL) 3792
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -64841.0 ( -168.86 by residue)
QMean score : 0.273
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