Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSRDIVQYSKIRTELYAYLTYLFSHNIRNHLPEITLDYLNRQISKMQAEIKMAKSFFVLDAKGMLMLKPSQFKEQGHKEGLLEHDLTEGIELESHVSFSDKYYFYQAVNEKRCILTDPYPSKKGNHLVVSASYPVYDQNNDLA--FVVCLQIP-LRVAIEISSPSKYFKTFSEGSMVMYFMISIMLTLVSLLLFVKCISSFWTAIVHFSSFDIKEVFHPIVLLTLALATFDLVKAIFEEEVLGKNSGDNHHAIHRTMIRFLGSIIIALAIEALMLVFKFSVSEPDKITYAVYLAIGVAVLLISLAIYVKFAYSVLPKRER |
4JGR Chain:A ((88-176)) | -------------------------------------------------------------------------------------------ELKTKVNLADASFFIKAKETKKTVISDSYSSRITGQPIFTICVPVLDSKRNVTDYLVAAIQIDYLKNLINLLSPDVYIEVVNQDGKMIFASGQASHAEDQKPVSGYLDDISWNMKVYPNPVTI----------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JGR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36940 for 461 contacts (-80.1/contact) +
2D Compatibility (PS) -9665 + (NN) -5717 + (LL) 18464
1D Compatibility (HY) -8000 + (ID) 1050
Total energy: -42908.0 ( -93.08 by residue)
QMean score : 0.195
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