Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVKESDILVVGGGHAGIEASLIAAKMGVRVHLITMLIDTIGLASCNPAIGGLGKGHLTKEVDVLGGAMGIITDHSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVSQEMTESLILENDEVVGVTTNINNTYRAKKVIITTGTFLKGVVHIGEHQNQNGR-FGENASNSLALNLRELGFKVERLKTGTCPRVAGNSIDFEGLEEHFGDANPPYFSYKTKDF-NPTQLSCFITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTIHKSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHALETKKIKGLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNQAPFILKRNEAYIGVLIDDLVTKGTNEPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEQDFYKELEKDKQAIQENLKRLKECVLTPSKEVLKRLNELGENPINDKMDGVSLLARDSFNLE-------KMRSFFSFLVPLNERVLEQIKIECKYNIYIEKQH---ENIAKMDSMLKVSIPKHFVFKGIPGLSLEAVEKLEKFRPKSLFEASEISGITPANLDVLHLYIHLRKNS |
3CP8 Chain:A ((23-639)) | -----DVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLNGLIHIGMDHFPGGRSTAEPPVEGLTESLASLGFSFGRLKTGTPPRIDSRSVDYTIVTEQPGDVDPVPFSFSSTSVANRNLVSCYLTKTTEKTHDILRTGFDRSPLFTG---------CPSIEDKISRFPDKSSHHIFLEPEGTDTVEMYVNGFSTSLPEDIQIAGLRSIPGLEEAKMIRPGYAIEYDFFHPWQIRSTMETRPVENLFFAGQINGTSGYEEAAAQGLMAGINAVRKILGKELIVLGRDQAYIGVLIDDLITKETKEPYRMFTSSAEHRLILRHDNADLRLRKIGYDCNLVSSDDLHRTESIIKRVQHCLEVMKTAKVTPA-EINTLLMNKGLQELKTPARALSLIKRPGISLQDILEHSLSVRSAAEELCN-DPRVAEQVQIEIKYEGYIKREQLVADRIARLDSL---HIPDNFNYDSLNSLSSEGREKLLKHRPATIGQASRILGVSPSDVSILMIRL------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3CP8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -296927 for 5257 contacts (-56.5/contact) +
2D Compatibility (PS) -64534 + (NN) -26663 + (LL) 1828
1D Compatibility (HY) -44400 + (ID) 13050
Total energy: -443746.0 ( -84.41 by residue)
QMean score : 0.509
|
|
|