Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTFEILKHLQADAIVLFMKVHNFHWNVKGTDFFNVHKATEEIYEGFADMFDDLAERIVQLGHHPLVTLSEAIKLTRVKEETKTSFHSKDIFKEILEDYKHLEKEFKELSNTAEKEGDKVTVTYADDQLAKLQKSIWMLEAHLA
4EVD Chain:A ((22-164))
-KTFEILKHLQADAIVLFMKVHNFHWNVKGTDFFNVHKATEEIYEEFADMFDDLAERIVQLGHHPLVTLSEAIKLTRVKEETKTSFHSKDIFKEILEDYKHLEKEFKELSNTAEKEGDKVTVTYADDQLAKLQKSIWMLQAHLA
General information:
TITO was launched using:
RESULT:
Template:
4EVD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35838 for 1062 contacts (-33.7/contact) +
2D Compatibility (PS) -15651 + (NN) -10958 + (LL) 208
1D Compatibility (HY) -20000 + (ID) 7050
Total energy: -89289.0 ( -84.08 by residue)
QMean score : 0.637
(partial model without unconserved sides chains):
PDB file :
Tito_4EVD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EVD-query.scw
PDB file :
Tito_Scwrl_4EVD.pdb
: