Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKF-ASVLVQLKTLALEKIERKLESKRLELQQNEREVLDKQAQLSAFK-------------NPELGGMSLFLQTQQLKSA----L---RMEIEYYQQEGENLTKDLKILEKDYLLANQELEKAKIILEKEKQKEKEILEKKEQALLDENAMILHWQKGGLHA |
3K29 Chain:A ((3-161)) | --RYPLEPVLSIKKDRVDRAEKVVKEKRRLLELEQEKLRERESERDKVKNHYMQKIRQLREQLDDGTTSDAILKMKAYIKVVAIQLSEEEEKVNKQKENVLAASKELERAEVELTKRRKEEEKTRLHKEEWMKEALKEEARQEEKEQDEMGQLLHQLHKQKQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K29.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 27832 for 694 contacts (40.1/contact) +
2D Compatibility (PS) -15873 + (NN) -18723 + (LL) 100
1D Compatibility (HY) 3600 + (ID) 950
Total energy: -4014.0 ( -5.78 by residue)
QMean score : 0.520
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