Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKDYQKLIVYLCDFLEKEVQKKGFKKVVYGLSGGLDSAVVGVLCQKVF-KENAHALLMPSSVSMPESRTDALNLCEKFSIPYTEYSIAPYDKIFGSHFKDASLTRKG--NFCARLRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELAYYLNIPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDIEALFQTKPIHLETLIQLGYAEILVKNIISRIQKNAFKLELPTIAKRFNPE
2E18 Chain:A ((5-245))
---DYDKVIERILEF----IREKGNNGVVIGISGGVDSATVAYLATKALGKEKVLGLIMPYFEN--KDVEDAKLVAEKLGIGYKVINIKPIVDSFVENL-ELNLDRKGLGNIMSRTRMIMLYAHANSLGRIVLGTSNRSEFLTGYFTKWGDGASDYAPIINLYKTEVWEIAKRIGVPERIVKKKPSAGLWEGQTDEDELGISYNLLDEILW---RMIDLKIGKEEIAKDLGIPLSLVERVEELIKKSEHKRRLPIGPSFEDLI
General information:
TITO was launched using:
RESULT:
Template:
2E18.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143615 for 1933 contacts (-74.3/contact) +
2D Compatibility (PS) -25383 + (NN) -12888 + (LL) 1204
1D Compatibility (HY) -16800 + (ID) 4600
Total energy: -202082.0 ( -104.54 by residue)
QMean score : 0.444
(partial model without unconserved sides chains):
PDB file :
Tito_2E18.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E18-query.scw
PDB file :
Tito_Scwrl_2E18.pdb
: