Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSNFQYSTLENIPKAFDILKDPPKKLYCVGDIKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGVDIIAQENALPK-TIMLSPCSLDFIYPTNNHKVIQEIAQN-GLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSGSMSSARLAQKYQKPLFVLPQR-LN-ESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAYLKFGDKLLEYELLGKIKRINHLVVLA |
| 3MAJ Chain:A ((130-287)) | -----------------------------------------IAIVGSRNASGAGLKFAGQLAADLGAAGFVVISGLARGIDQAAHRASLSSGTVAVLAGGHDKIYPAEHEDLLLDIIQTRGAAISEMPLGHVPRGKDFPRRNRLISGASVGVAVIEAAYRSGSLITARRAADQGREVFAVPGSPLDPRAAGTNDLIKQGATLITSASDIVEAVASILEGEPDTGDRTRILALLGPSPVGIDDLIRLSGISPAVVRTILLELELAGRLERH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64319 for 1344 contacts (-47.9/contact) +
2D Compatibility (PS) -16923 + (NN) -5935 + (LL) 2512
1D Compatibility (HY) -5200 + (ID) 2450
Total energy: -92315.0 ( -68.69 by residue)
QMean score : 0.470
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