Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVTFQVPSITCNHCVDKIEKFVGEIEGVSFIDASVEKKSVVVEFD----TPATQDLIKEALLDAGQEVV
3CJK Chain:B ((4-64))
--VTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKT---LQEAIDDMGFDAV
General information:
TITO was launched using:
RESULT:
Template:
3CJK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50553 for 361 contacts (-140.0/contact) +
2D Compatibility (PS) -6096 + (NN) -1125 + (LL) 492
1D Compatibility (HY) -4800 + (ID) 1250
Total energy: -63332.0 ( -175.43 by residue)
QMean score : 0.848
(partial model without unconserved sides chains):
PDB file :
Tito_3CJK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CJK-query.scw
PDB file :
Tito_Scwrl_3CJK.pdb
: