Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKILVIQGPNLNMLGHRDPRLYGMVTLDQIHEIMQTFVKQGNLDVELEFFQTNFEGEIIDKIQESVGSDYEGIIINPGAFSHTSIAIADAIMLAGKPVIEVHLTNIQAREEFRKNSYTGAACGGVIMGFGPLGYNMALMAMVNILAEMKAFQEAQKNNPNNPNNPINNQK
2XD9 Chain:A ((1-153))
MKILVIQGPNLNMLGHRDPRLYGMVTLDQIHEIMQTFVKQGNLDVELEFFQTNFEGEIIDKIQESVGSDYEGIIINPGAFSHTSIAIADAIMLAGKPVIEVHLTNIQAREEFRKNSYTGAACGGVIMGFGPLGYNMALMAMVNILAEMKAFQE-----------------
General information:
TITO was launched using:
RESULT:
Template:
2XD9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117679 for 1204 contacts (-97.7/contact) +
2D Compatibility (PS) -17166 + (NN) -7078 + (LL) -344
1D Compatibility (HY) -24400 + (ID) 7650
Total energy: -174317.0 ( -144.78 by residue)
QMean score : 0.569
(partial model without unconserved sides chains):
PDB file :
Tito_2XD9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XD9-query.scw
PDB file :
Tito_Scwrl_2XD9.pdb
: