Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYFKILATSFSLFLNSWLKRSKLSSVPFLSKRQISKSVQAIKIDANNKAIKYPPSVDNTVHNRMLSGSLNFNTENTNPKKNPTTTEKWIKF
3W1O Chain:A ((78-103))
-----------------------------------ESILAVKEKLQNSDFSTEPLVKNIIHVLEYAIKNEKTVIFHF--------------
General information:
TITO was launched using:
RESULT:
Template:
3W1O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4045 for 115 contacts (35.2/contact) +
2D Compatibility (PS) -2550 + (NN) 1192 + (LL) 3368
1D Compatibility (HY) -1200 + (ID) 400
Total energy: 4455.0 ( 38.74 by residue)
QMean score : 0.196
(partial model without unconserved sides chains):
PDB file :
Tito_3W1O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W1O-query.scw
PDB file :
Tito_Scwrl_3W1O.pdb
: