Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNAFKAFALLIVFFSNALLAQDLKIAAAANLTRALKALVKEFQKEHPKDAINISFNSSGKLYAQIAQNAPFDLFISADIARPKKLYDEKI--TPFKEEVYAKGVLVL---------WSENLKMDSLEILKDPKIKRIAMANPKLAPYGKASMEVLDRLKLTPSLKSKIIYGASISQAHQFIATKNAQIG--FGALSLIDKKDKNLSYFIIDKTLYNPIEQALIITKNGANNPLAKVFKDFLFSPKARAIFKEYGYIVD |
| 3AXF Chain:A ((9-236)) | -----------------------ITVFAACSLTNAMQDIATQFKKEKGVDVVS-SFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTATRQTLLGNSLVVVAPKASVQKDFTIDSKTNWTSLLNG---GRLAVGDPEHVPAGIYAKEALQKLGAWDTLSPKLAPAEDVCGALALVERNEAPLGIVYGSDAVASKGVKVVATFPEDS--HKKVEYPVAVVE-GHNNATVKAFYDYLKGPQAAEIFKRYGFTIK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AXF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105862 for 1845 contacts (-57.4/contact) +
2D Compatibility (PS) -22499 + (NN) -5197 + (LL) 3020
1D Compatibility (HY) -8000 + (ID) 3200
Total energy: -141738.0 ( -76.82 by residue)
QMean score : 0.560
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