Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGIIYLILFLIVIYLLYRILDVLEQK
2YIU Chain:B ((234-251))
-SVIFLIVLAALLYLTNKK-------
General information:
TITO was launched using:
RESULT:
Template:
2YIU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12436 for 63 contacts (-197.4/contact) +
2D Compatibility (PS) -1957 + (NN) -1637 + (LL) 964
1D Compatibility (HY) -2400 + (ID) 250
Total energy: -17716.0 ( -281.21 by residue)
QMean score : 0.860
(partial model without unconserved sides chains):
PDB file :
Tito_2YIU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YIU-query.scw
PDB file :
Tito_Scwrl_2YIU.pdb
: